DLCpar Change Log ----------------------- dlcpar-2.0.1 (2020/06/18) ----------------------- - clarify how to cite software - remove unused compbio libraries dlcpar-2.0 (2020/06/15) ----------------------- - refactor to single CLI command - change file extensions - add ILP formulation for MPR problem - change default costs to integers (D=2, L=2, C=1) - simplify compbio libraries dlcpar-1.1.0 (2019/06/21) ----------------------- - add dlcscape dlcpar-1.0.2 (2017/10/17) ----------------------- - remove restriction on max dups from LCA mapping dlcpar-1.0.1 (2016/10/20) ----------------------- - add convergence-based stop criterion to dlcpar_search dlcpar-1.0 (2016/09/28) ----------------------- - count number of optimal reconciliations - uniformly sample from optimal reconciliations dlcpar-0.9.1 (2013/12/11) ----------------------- - fix installation dlcpar-0.9 (2013/05/17) ----------------------- - initial release